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DATA ANALYSIS
DATABASES
B.burgdorferi
B.cereus
B.henselae
B.pseudomallei
C.albicans
C.glabrata
C.krusei
C.tropicalis
C.jejuni
C.neoformans var grubii
E.coli
E.faecalis
E.faecium
H.influenzae
H.pylori
Leptospira spp.
M.catarrhalis
N.meningitidis
S.agalactiae
S.aureus
S.dysgalactiae
S.enterica
S.epidermidis
S.pneumoniae
S.pyogenes
S.suis
V.vulnificus
SUBMISSIONS
NEWS
LINKS
 
CONCATENATION - Streptococcus pneumoniae
(sequences are trimmed to the +1 reading frame)

 
S.pneumoniae Specific Help Click for help

CONCATENATE ONE EXAMPLE OF EACH ST in MEGA or FASTA format

or CLICK HERE to add your own profile a list of all STs

or CLICK HERE to add your profile to our reference set of STs

OR

CONCATENATE THE NUCLEOTIDE SEQUENCES AT THE SEVEN LOCI - Please enter the ST numbers of the STs whose sequences you would like to concatenate, ie 46 for ST46

ST ST ST ST ST ST ST ST
               

OR

CONCATENATE YOUR OWN ALLELIC PROFILE - Enter your profile below (below each box is the highest allele number present in the database)
aroe gdh_ gki_ recP spi_ xpt_ ddl_
ddl not included - see Help File
295 418 415 263 414 563  

OR

CONCATENATE YOUR OWN SEQUENCES (enter only 1 unbroken string ie no line breaks etc..)

aroe  
 
gdh_
 
gki_
 
recP
 
spi_
 
xpt_
 
 
 




 
Profile Query

 
Locus Query